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hubUtils - Core 'hubverse' Utilities

Core set of low-level utilities common across the 'hubverse'. Used to interact with 'hubverse' schema, Hub configuration files and model outputs and designed to be primarily used internally by other 'hubverse' packages. See Reich et al. (2022) <doi:10.2105/AJPH.2022.306831> for an overview of Collaborative Hubs.

Last updated

hubverse

7.73 score 7 stars 9 dependents 94 scripts 652 downloads

hubEvals - Tools for Scoring and Evaluating Hubverse Model Outputs

Provides tools for scoring and evaluating 'hubverse' model outputs against observed data, wrapping scoring workflows from the 'scoringutils' package and bridging hubverse model output formats to 'scoringutils' forecast classes.

Last updated

hubverse

6.84 score 6 stars 3 dependents 18 scripts 346 downloads

hubData - Tools for accessing and working with hubverse data

A set of utility functions for accessing and working with forecast and target data from Infectious Disease Modeling Hubs.

Last updated

hubverse

6.55 score 7 stars 3 dependents 127 scripts

hubValidations - Testing framework for hubverse hub validations

This package aims at providing a simple interface to run validations on data and metadata submitted to a hubverse modeling hub. Validation tests can be run at different levels (single file, single folder, whole repository) and locally as well as part of a continuous integration workflow.

Last updated

hubverse

5.75 score 4 stars 1 dependents 56 scripts

hubAdmin - Utilities for Administering Hubverse Hubs

A set of utility functions for administering 'hubverse' Hubs.

Last updated

hubverse

4.81 score 2 stars 2 dependents 27 scripts

hubDevs - Utilities for Creating and Standardising Hubverse Packages

Provides utilities for creating and maintaining Hubverse R packages with consistent structure, documentation, and CI/CD workflows. Includes functions for setting up pkgdown sites, GitHub Actions, README templates, and code formatting standards.

Last updated

hubversequarto

3.90 score 3 scripts

hubPredEvalsData - Data Creation for Hub Prediction Evaluations via predevals

This package generates data objects with scores for predictions in a hub, to be displayed on a dashboard using predevals.

Last updated

3.65 score 2 stars 1 scripts

hubCI - Toolbox for hubverse Continuous Integration

Functions for setting up hubverse Continuous Integration workflows.

Last updated

hubverse

3.48 score 1 dependents

hubStyle - pkgdown template and utilities for hubverse docs

This is a private template for use by hubverse packages. Please don't use it for your own non-hubverse package.

Last updated

2.00 score 2 scripts